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rdms:access:lwp [2023/08/09 15:29]
burcu |
rdms:access:lwp [2024/03/26 10:12] (current)
jelte ↷ Links adapted because of a move operation |
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| The Linux Workplace (LWP) is a standardized University workplace containing a Linux operating system where you can [[https://lwpwiki.webhosting.rug.nl/index.php/Remote_access|remotely]] access the system via SSH or using NoMachine. LWP also allows you to access the X and Y:drives located in the University Workplace (UWP). As it is in Hábrók, ''iCommands'' are already installed in the LWP. You just need to create an iRODS configuration file called ''irods_environment.json'' and place it in this location in your home directory: ''~/.irods/''. | The Linux Workplace (LWP) is a standardized University workplace containing a Linux operating system where you can [[https://lwpwiki.webhosting.rug.nl/index.php/Remote_access|remotely]] access the system via SSH or using NoMachine. LWP also allows you to access the X and Y:drives located in the University Workplace (UWP). As it is in Hábrók, ''iCommands'' are already installed in the LWP. You just need to create an iRODS configuration file called ''irods_environment.json'' and place it in this location in your home directory: ''~/.irods/''. |
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| | ===== Working on command line in Linux ===== |
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| | If it is your first time working with command line in Linux environment please check this [[https://wiki.hpc.rug.nl/habrok/command_line/working_on_the_command_line_-_part_2|introduction section]] from the Hábrók user manual. |
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| ===== Accessing the RDMS ===== | ===== Accessing the RDMS ===== |
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| Check if it is created under ''.irods/'' and then proceed with creating and configuring your environment file as explained [[rdms:access:linux:createprofile| iCommands]] section: | Check if it is created under ''.irods/'' and then proceed with creating and configuring your environment file as explained [[rdms:access:linux:icommands| iCommands]] section: |
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| {{:rdms:access:lwp_screenshot2.png?400| }} | {{:rdms:access:lwp_screenshot2.png?450| }} |
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| Now you are ready to initilaze the RDMS connection: | Now you are ready to initilaze the RDMS connection: |
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| {{:rdms:access:lwp_screenshot3.png?400| }} | {{:rdms:access:inkedlwp_screenshot3.jpg?450| }} |
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| Please refer to the [[rdms:access:linux:createprofile| iCommands]] section for further information on the configuration and use cases of the various ''iCommands''. | Please refer to the [[rdms:access:linux:icommands| iCommands]] section for further information on the configuration and various use cases of the ''iCommands''. |
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| ===== Transfering data from Y:drive to the RDMS ===== | |
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| Eventhough the UWP is a Windows OS, you can still use the ''iCommands'' to benfit from its functionalities and speed. The Y:drive is available under ''/media/ydrive''. | |
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| First go the location of Y:drive and check the content: | |
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| {{:rdms:access:lwp_screenshot5.png?700| }} | |
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| Navigate to the folder where you have your data: | |
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| {{:rdms:access:lwp_screenshot6.png?600| }} | |
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| If you already initiated the RDMS connection as explained above or in the ''iCommands'' sections, then you can start performing tasks using ''iCommands''. | |
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| {{:rdms:access:lwp_screenshot7.png?600| }} | |
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